Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899585.1_cds_XP_016449569.1_44103
CDS Infomation

[gene=LOC107774531] [db_xref=GeneID:107774531] [protein=F-box protein At5g03100-like] [protein_id=XP_016449569.1] [location=complement(join(28407..28712,28948..29118,29848..30819))] [gbkey=CDS]
Sequence

ATGTCTGAATCAGAAGAAGAAGAAGAAAAGGCGGATTTGCTTCACGTGAAACGTCGTAAA
ACTGAAAAAACAGATCGAATTAGCGCCTTGCCAGATTCTTTGATACTTCACATCCTCTCT
TTCTTGCAGATGGATGAAGTTATACGAACTGGAGTTTTGTCAAAAAGGTGGCACCTCTTG
TGGACTTCAGCACAAACCCTAATTTTCAGTTACTCAGGCCCACATGATCATGGTACCTAC
AGTAAGTTCGTTACTTTTATTGATGATACCCTACTTCGTTGCCAGCCTAGTAAATTGAAC
AAGTTTTCGGTCGATTTTATTTACAGCAGACGCTTTGTTCGACACGTTAATAAATGGATT
ACATTCGTCAAGAATAAATATGTGGAGGAACTGAATCTTCATCTAAGGTCACGAGATTTG
AATGAGATTTACAATTTACCCGAGCTTATGTACTCCAATATGTGCTTACGAGACCTAAGT
TTGCGCCATTGTAATCTTGTACCAAAAGGGGAGATTAATTGGCCTTCCCTTAGGATTTTA
GAAATTGGATATGCTGAATTGAACCAGGATTTTATTAAAAAGATTTGTTCTGGATGTCCT
GCTTTGGAGTCTCTGAAGTTTAGGAGTTGTTACGGGATTGGTTGTTTTAATATTGATTCC
AAAAGTGTGAAAAAGTTGGCGATCAAAGGCTGTTGGGATGACGATGATGATGATAATGAA
GAAGAAAAACAGCTGAGAATATATGCTAGGAATGTTACTTCACTGGAGATTAGCGGCCAT
TTTCATAAAAAGATACTTGTTCTTCTGGATGTAAAAGCTCTGGTCGATGCTAAGCTAAAT
GTTTATAGGAAGCCAGATGAGTACATACATAATTACGAGGGTGATTTTAAAACTGATCAG
AATATGGTGAAAGATCTCCTTGTGTCGCTCCAGCACGTTGAGAAACTCTCCATCGGAACA
TGGTGTTTGCAGGTCCTTACGACTTTGGAGATGAGAACCTTGCCATGCCCCAGGATGAGA
TGCAAATACTTGACCTTAAACACTCATATGAAGAAATGGGAGCTTCCTGGGATAACAATC
CTTCTACAAAGCTGTCCTCAGGTTGAGACCTTGAACATAGACATGACATCCCGCTTCGAA
GAGTATTATTTTGGGTCGTATTTTAAGAAATCTAACGACTTTAGTGGAGGAAATTACTGG
ATATCAAGGCCTTGTTGGGTGCTGTATCTCAAGACTTTAAGGATTTACGGCTTCTGGGGT
GGGAATGAATACATCCTTTCATTTCTGGAAGTTGTGCTAAAGAATGCAATGGTGCTTGAG
AAAATCTTCATTGGCTCCTCTAAAAATGAACCATGGATTCCTACAGATGTGGACTACAGA
AGAGTTGCAAATAAGATGCTAAGCTTTCCGAGATCATCAAAGGATGCTGTTATTCTGTTC
TCTGGTTGA

Peptide Sequence

PEP ID

XP_016449569.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MSESEEEEEKADLLHVKRRKTEKTDRISALPDSLILHILSFLQMDEVIRTGVLSKRWHLL
WTSAQTLIFSYSGPHDHGTYSKFVTFIDDTLLRCQPSKLNKFSVDFIYSRRFVRHVNKWI
TFVKNKYVEELNLHLRSRDLNEIYNLPELMYSNMCLRDLSLRHCNLVPKGEINWPSLRIL
EIGYAELNQDFIKKICSGCPALESLKFRSCYGIGCFNIDSKSVKKLAIKGCWDDDDDDNE
EEKQLRIYARNVTSLEISGHFHKKILVLLDVKALVDAKLNVYRKPDEYIHNYEGDFKTDQ
NMVKDLLVSLQHVEKLSIGTWCLQVLTTLEMRTLPCPRMRCKYLTLNTHMKKWELPGITI
LLQSCPQVETLNIDMTSRFEEYYFGSYFKKSNDFSGGNYWISRPCWVLYLKTLRIYGFWG
GNEYILSFLEVVLKNAMVLEKIFIGSSKNEPWIPTDVDYRRVANKMLSFPRSSKDAVILF
SG

Transcript Sequence

Gene sequence data has not been registered.